SNP Profiles matching GEBP 463/A-F [ADI]

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CC	GG	CC	GG	AC	CC	AG	CC	GG	GG	AA	CC
1._RUQ_32	_	_	CC	GG	CC	_	AC	CC	AG	CC	_	_	AA	_
2._PA_56_[PER]	_	_	CC	GG	CC	_	AC	CC	AG	CC	_	_	AA	_
3._RUQ_32	TT	CC	CC	GG	CC	GG	AC	CC	AG	CC	GG	GG	AA	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AG	AC	CT	GT	CG	AC	CT	CT	CT	GG	GG	TT	AC	GG
1._RUQ_32	AA	AC	CT	GT	CG	CC	_	TT	_	GG	_	_	_	GG
2._PA_56_[PER]	AA	AC	CT	GT	CG	CC	_	TT	_	GG	_	_	_	GG
3._RUQ_32	AA	AC	CT	GT	CG	CC	TT	TT	CT	GG	AG	TT	AA	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CC	GG	AG	CC	CC	GG	GG	TT	TT	TT	CC	CT	CG
1._RUQ_32	_	CC	_	AG	_	CC	_	_	_	TT	_	_	CT	CG
2._PA_56_[PER]	_	CC	_	AG	_	CC	_	_	_	TT	_	_	CT	CG
3._RUQ_32	CC	CC	-	AG	CC	CC	GG	GG	TT	TT	CT	CC	CT	CG

	43
_Input profile	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_32	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._PA_56_[PER]	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._RUQ_32	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: GEBP_463_/A-F_[ADI] RUQ_1668

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._PA_56_[PER] RUQ_32

91.7 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

2._PA_56_[PER]

91.7 %
24 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Marper D 238

Dapeng Zhang, 2016

3._PA_56_[PER] RUQ_32

90.5 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP899	32	TcSNP998	33	TcSNP999	34	TcSNP1060	35	TcSNP1063
36	TcSNP1111	37	TcSNP1126	38	TcSNP1253	39	TcSNP1309	40	TcSNP1439
41	TcSNP1442	42	TcSNP1458	43	TcSNP1484